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Explain how an antibody could be useful for purifying a protein and for determining its concentration.

Short Answer

Expert verified

The proteins bind to antibodies at sites other than the antigen binding domain, an immobilized form of the proteins is used in purification. It involves selective enrichment or specific isolation of antibodies from serum. Protein concentration can be estimated by measuring the UV absorbance at 280nm; a strong peak shows here due to Tryptophan or Tyrosine residues. This can be readily converted into protein concentration using the Beer-Lambert law.

Step by step solution

01

Physiochemical fractionation

A separation process in which a certain quantity of a mixture like gas, solid, liquid, or enzymes is divided during a phase transition into several tiny fractions in which the composition differs according to a gradient.

02

Class-specific affinity

This type of affinity allows for purifying a selected class of immunoglobulin and discarding the unwanted types. A particular antibody called IgG binds to solid-phase by immobilized biological ligands (proteins, lectins, etc.)

03

Antigen-specific affinity

This is based on affinity purification in which antibodies in a sample bind to a particular antigen molecule through their specific antigen-binding domain. It purifies all antibodies that bind to the antigen without considering antibody class or isotypes.

04

Beer-Lambert law

It states that there is a linear relationship between the concentration and the absorbance of the suspension.

A = ɛcl

Where,

A = absorbance

ɛ = molar absorptivity

c = concentration

l = length of the light path

Hence, antibody can be used to purify proteins.

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Most popular questions from this chapter

(a) The ESI-MS spectrum below was obtained for hen egg-white lysozyme (HEWL). Using peaks 5 and 6, calculate the molecular mass of HEWL (see Sample Calculation 5-1).

[http://www.astbury.leeds.ac.uk/facil/MStut/mstutorial.htm. Published by A.E. Ashcroft, Astbury Centre for Structural Molecular Biology, University of Leeds (2000)]

(b) What is the charge on the ion that makes peak 5?

(a) In what order would the amino acids Arg, His, and Leu be eluted from a carboxymethyl column at pH6 ?

(b) In what order would Glu, Lys, and Val be eluted from a diethylaminoethyl column at pH 8?

You are trying to purify a protein that is soluble in a solution of 2 M ammonium sulfate. After centrifugation to remove other proteins that have precipitated at this high salt concentration, you recover the supernatant to assay the target protein’s activity in a cell culture system.

(a) Explain why the cells die when incubated with the supernatant.

(b) What procedure could you perform to correct the problem? (Hint: See Section 2-1D).

Electrospray ionization mass spectrometry (ESI-MS) of proteins involves creating positively charged ions of the protein and separating them according to their mass-to-charge ratio (m/z).

(a) What causes the different positive charges on different particles of the protein?

(b) The amino acid composition (in numbers of residues per chain) of hen egg-white lysozyme (HEWL) is as follows:

P 2 Y 3 N 14 H 1

D 7 M 2 L 8 E 2

C 8 R 11 G 12 F 3

A 12 I 6 K 6 V 6

S 10 W 6 T 7 Q 3

What is the maximum positive charge that can be present on a HEWL ion?

Protein X has an absorptivity of 0.4mL · mg-1· cm-1 at 280nm. What is the absorbance at 280nm of a 2.0 mg · mL-1solution of protein X? (Assume the light path is 1cm.)

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