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Are there nucleotide substitutions that will not be detected by electrophoretic studies of a gene's protein product?

Short Answer

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Explain your answer. Answer: Yes, there are nucleotide substitutions that will not be detected by electrophoretic studies of a gene's protein product. Synonymous substitutions, which do not change the amino acid sequence, will not be detected since the protein product is identical to the original. Additionally, non-synonymous substitutions that do not significantly alter the protein's size, charge, or shape might not be detected by electrophoresis.

Step by step solution

01

Understanding nucleotide substitutions

Nucleotide substitutions are changes in the DNA sequence where one nucleotide (A, T, C, or G) is replaced with another. There are two main types of nucleotide substitutions: synonymous (silent) and non-synonymous (missense) substitutions. Synonymous substitutions do not change the amino acid encoded by a codon, while non-synonymous substitutions change the amino acid encoded by a codon.
02

Understanding electrophoresis

Electrophoresis is a laboratory technique used to separate molecules, like proteins, based on their size, charge, or shape. In the context of studying a gene's protein product, electrophoresis is used to separate the protein of interest from other proteins in a sample. The separated proteins can be visualized as distinct bands on a gel, and their relative positions can provide information about the effects of nucleotide substitutions on the protein product.
03

Effects of nucleotide substitutions on electrophoresis

A nucleotide substitution can have different effects on the electrophoretic behavior of a protein depending on the type of substitution and the amino acid(s) involved: 1. Synonymous substitution: Since it does not change the amino acid sequence, the protein product is identical to the original, and it will have the same electrophoretic behavior. In this case, the nucleotide substitution will not be detected by electrophoretic studies of the protein product. 2. Non-synonymous substitution: The substitution changes the amino acid sequence of the protein and might alter its size, charge, or shape, which can potentially be detected by electrophoresis. However, if the amino acid change has minimal impact on the protein's electrophoretic behavior, the substitution might not be detected.
04

Conclusion

In conclusion, there are nucleotide substitutions that will not be detected by electrophoretic studies of a gene's protein product. Most notably, synonymous substitutions and non-synonymous substitutions that do not significantly alter the protein's size, charge, or shape will not be detected by electrophoretic studies.

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Most popular questions from this chapter

Population geneticists study changes in the nature and amount of genetic variation in populations, the distribution of different genotypes, and how forces such as selection and drift act on genetic variation to bring about evolutionary change in populations and the formation of new species. From the explanation given in the chapter, what answers would you propose to the following fundamental questions? (a) How do we know how much genetic variation is in a population? (b) How do geneticists detect the presence of genetic variation as different alleles in a population? (c) How do we know whether the genetic structure of a population is static or dynamic? (d) How do we know when populations have diverged to the point that they form two different species? (e) How do we know the age of the last common ancestor shared by two species?

The use of nucleotide sequence data to measure genetic variability is complicated by the fact that the genes of higher eukaryotes are complex in organization and contain \(5^{\prime}\) and \(3^{\prime}\) flanking regions as well as introns. Researchers have compared the nucleotide sequence of two cloned alleles of the \(\gamma\) -globin gene from a single individual and found a variation of 1 percent. Those differences include 13 substitutions of one nucleotide for another and 3 short DNA segments that have been inserted in one allele or deleted in the other. None of the changes takes place in the gene's exons (coding regions). Why do you think this is so, and should it change our concept of genetic variation?

In a recent study of cichlid fish inhabiting Lake Victoria in Africa, Nagl et al. (1998. Proc. Natl. Acad. Sci. IUSA/ 95: \(14,238-14,243\) ) examined suspected neutral sequence polymorphisms in noncoding genomic loci in 12 species and their putative river-living ancestors. At all loci, the same polymorphism was found in nearly all of the tested species from Lake Victoria, both lacustrine and riverine. Different polymorphisms at these loci were found in cichlids at other African lakes. (a) Why would you suspect neutral sequences to be located in noncoding genomic regions? (b) What conclusions can be drawn from these polymorphism data in terms of cichlid ancestry in these lakes?

In a population of cattle, the following color distribution was noted: \(36 \%\) red \((R R), 48 \%\) roan \((R r),\) and \(16 \%\) white \((r r) .\) Is this population in a Hardy-Weinberg equilibrium? What will be the distribution of genotypes in the next generation if the HardyWeinberg assumptions are met?

What is the original source of genetic variation in a population? Which natural factors affect changes in this original variation?

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