Chapter 18: Problem 16
It can be said that modern biology is experiencing an "omics" revolution. What does this mean? Explain your answer.
Chapter 18: Problem 16
It can be said that modern biology is experiencing an "omics" revolution. What does this mean? Explain your answer.
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Get started for freeIn Section 18.8 we briefly discussed The Human Proteome Map (HPM). An interactive Web site for the HPM is available at http:I/ www.humanproteomemap.org. Visit this site, and then answer the questions in parts (a) and (b) and complete part (c). (a) How many proteins were identified in this project? (b) How many fetal tissues were analyzed? (c) Use the "Query" tab and select the "Gene family" dropdown menu to do a search on the distribution of proteins encoded by a pathway of interest to you. Search in fetal tissues, adult tissues, or both.
Describe three major goals of the Human Genome Project.
In this chapter, we focused on the analysis of genomes, transcriptomes, and proteomes and considered important applications and findings from these endeavors. At the same time, we found many opportunities to consider the methods and reasoning by which much of this information was acquired. From the explanations given in the chapter, what answers would you propose to the following fundamental questions? (a) How do we know which contigs are part of the same chromosome? (b) How do we know if a genomic DNA sequence contains a protein-coding gene? (c) What evidence supports the concept that humans share substantial sequence similarities and gene functional similarities with model organisms? (d) How can proteomics identify differences between the number of protein- coding genes predicted for a genome and the number of proteins expressed by a genome? (e) How has the concept of a reference genome evolved to encompass a broader understanding of genomic variation in humans? (f) How have microarrays demonstrated that, although all cells of an organism have the same genome, some genes are expressed in almost all cells, whereas other genes show celland tissue-specific expression?
Annotation of the human genome sequence reveals a discrepancy between the number of protein-coding genes and the number of predicted proteins actually expressed by the genome. Proteomic analysis indicates that human cells are capable of synthesizing more than 100,000 different proteins and perhaps three times this number. What is the discrepancy, and how can it be reconciled?
How do high-throughput techniques such as computer. automated, next-generation sequencing, and mass spectrometry facilitate research in genomics and proteomics? Explain.
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