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Shown below are two homologous lengths of the alpha and beta chains of human hemoglobin. Consult a genetic code dictionary (Figure 13.7 ) and determine how many amino acid substitutions may have occurred as a result of a single nucleotide substitution. For any that cannot occur as a result of a single change, determine the minimal mutational distance.

Short Answer

Expert verified
Answer: In the given Alpha and Beta chain sequences, one amino acid substitution (Proline to Serine) can occur as a result of a single nucleotide substitution.

Step by step solution

01

Divide the sequences into codons

We'll divide the given sequences into codons - groups of 3 nucleotides each that correspond to an amino acid. Alpha chain: ATG CCA GTG Beta chain: ATG TCA GTG
02

Identify amino acids for each codon using a genetic code dictionary

Using a genetic code dictionary (Figure 13.7), we will identify the corresponding amino acids for each codon. Alpha chain: Met Pro Val Beta chain: Met Ser Val
03

Determine single nucleotide substitutions that lead to amino acid changes

Now we need to analyze the differences in amino acid sequences caused by single nucleotide substitutions. For the second amino acid, we have Proline (Pro) in the Alpha chain and Serine (Ser) in the Beta chain. Let's consult the genetic code dictionary to see if there is a single nucleotide substitution that can cause this change. Proline (Pro) codons: CCU, CCC, CCA, CCG Serine (Ser) codons: UCU, UCC, UCA, UCG, AGU, AGC It's easy to notice that by changing the second nucleotide of the Proline codon CCA (Alpha chain) to a T, we get the Serine codon TCA (Beta chain). So, it's a single nucleotide substitution which results in an amino acid change.
04

Calculate minimal mutational distance for cases where single nucleotide substitution does not result in an amino acid change

In this particular example, all observed amino acid changes can occur as a result of single nucleotide substitutions. However, let's consider a hypothetical case where an amino acid change does not occur with a single change: Alpha chain: Met Pro Val Beta chain: Met Phe Val Phenylalanine (Phe) codons: UUU, UUC In this case, there is no single nucleotide substitution that can convert a Proline codon to a Phenylalanine codon. To find the minimal mutational distance, we need to find the shortest number of nucleotide changes required for the conversion: - CCA (Pro) -> UCA (Ser) -> UUA (Leu) -> UUA (Phe) (3 changes) So, the minimal mutational distance in this hypothetical case is 3. In conclusion, for the given Alpha and Beta chain sequences, there is one amino acid substitution (Pro->Ser) that can occur as a result of a single nucleotide substitution. For other cases where single substitution does not lead to amino acid change, it may be necessary to calculate the minimal mutational distance as shown in the example.

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Most popular questions from this chapter

The genetic difference between two Drosophila species, \(D\). heteroneura and \(D .\) sylvestris, as measured by nucleotide diversity, is about 1.8 percent. The difference between chimpanzees \((P\) troglodytes and humans (H. sapiens) is about the same, yet the latter species are classified in different genera. In your opinion, is this valid? Explain why.

A form of dwarfism known as Ellis-van Creveld syndrome was first discovered in the late 1930 s, when Richard Ellis and Simon van Creveld shared a train compartment on the way to a pediatrics meeting. In the course of conversation, they discovered that they each had a patient with this syndrome. They published a description of the syndrome in \(1940 .\) Affected individuals have a short-limbed form of dwarfism and often have defects of the lips and teeth, and polydactyly (extra fingers. The largest pedigree for the condition was reported in an Old Order Amish population in eastern Pennsylvania by Victor McKusick and his colleagues (1964). In that community, about 5 per 1000 births are affected, and in the population of \(8000,\) the observed frequency is 2 per \(1000 .\) All affected individuals have unaffected parents, and all affected cases can trace their ancestry to Samuel King and his wife, who arrived in the area in \(1774 .\) It is known that neither King nor his wife was affected with the disorder. There are no cases of the disorder in other Amish communities, such as those in Ohio or Indiana. (a) From the information provided, derive the most likely mode of inheritance of this disorder. Using the HardyWeinberg law, calculate the frequency of the mutant allele in the population and the frequency of heterozygotes, assuming Hardy-Weinberg conditions. (b) What is the most likely explanation for the high frequency of the disorder in the Pennsylvania Amish community and its absence in other Amish communities?

A number of comparisons of nucleotide sequences among hominids and rodents indicate that inbreeding may have occurred more in hominid than in rodent ancestry. When an ancient population bottleneck leaving approximately 10,000 individuals occurred in humans, Knight (2005) and Bakewell (2007) both suggested that this event may have left early humans with a greater chance of genetic disease. Why would a population bottleneck influence the frequency of genetic disease?

The ability to taste the compound PTC is controlled by a dominant allele \(T,\) while individuals homozygous for the recessive allele \(t\) are unable to taste PTC. In a genetics class of 125 students, 88 can taste \(\mathrm{PTC}\) and 37 cannot. Calculate the frequency of the \(T\) and \(t\) alleles and the frequency of the genotypes in this population.

Consider a population in which the frequency of allele \(A\) is \(p=0.7\) and the frequency of allele \(a\) is \(q=0.3,\) and where the alleles are codominant. What will be the allele frequencies after one generation if the following occurs? (a) \(w_{A A}=1, w_{A a}=0.9, w_{a a}=0.8\) (b) \(w_{A A}=1, w_{A a}=0.95, w_{a a}=0.9\) (c) \(w_{A A}=1, w_{A a}=0.99, w_{a a}=0.98\) (d) \(w_{A A}=0.8, w_{A a}=1, w_{a a}=0.8\)

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