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Keeping in mind the life cycle of bacteriophages discussed earlier in the text (see Chapter 6 ), consider the following problem: During the reproductive cycle of a temperate bacteriophage, the viral DNA inserts into the bacterial chromosome where the resultant prophage behaves much like a Trojan horse. It can remain quiescent, or it can become lytic and initiate a burst of progeny viruses. Several operons maintain the prophage state by interacting with a repressor that keeps the lytic cycle in check. Insults (ultraviolet light, for example) to the bacterial cell lead to a partial breakdown of the repressor, which in turn causes the production of enzymes involved in the lytic cycle. As stated in this simple form, would you consider this system of regulation to be operating under positive or negative control?

Short Answer

Expert verified
Answer: The regulation system operates under negative control, as the repressor inhibits the lytic cycle when it is present.

Step by step solution

01

Understand positive and negative control

Positive and negative control are two regulation mechanisms for controlling gene expression. In positive control, the regulatory protein (activator) binds to the DNA sequence and increases the expression, while in negative control, the regulatory protein (repressor) binds to the DNA sequence and decreases the expression. Since the question states that the repressor keeps the lytic cycle in check, you will need to determine if this represents positive or negative control.
02

Analyze the regulation mechanism described in the exercise

The exercise states that during the reproductive cycle of a temperate bacteriophage, the viral DNA inserts into the bacterial chromosome, and several operons maintain the prophage state by interacting with a repressor. This repressor keeps the lytic cycle in check. Insults to the bacterial cell, such as ultraviolet light, lead to a partial breakdown of the repressor and cause the production of enzymes that are involved in the lytic cycle.
03

Determine if the regulation mechanism represents positive or negative control

In this situation, the repressor acts to keep the lytic cycle in check by preventing the production of enzymes involved in the lytic cycle. When the repressor is broken down, the operons are no longer repressed, and the lytic cycle is activated. This regulatory mechanism functions by inhibiting the lytic cycle when the repressor is present, which means that it operates under negative control. Therefore, the regulation system described in the exercise can be considered as operating under negative control.

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Most popular questions from this chapter

The locations of numerous \(\operatorname{lac} I\) and \(\operatorname{lac} I^{\mathrm{S}}\) mutations have been determined within the DNA sequence of the lacI gene. Among these, \(l a c I\) mutations were found to occur in the \(5^{\prime}\) -upstream region of the gene, while \(\operatorname{lac} I^{\mathrm{S}}\) mutations were found to occur farther downstream in the gene. Are the locations of the two types of mutations within the gene consistent with what is known about the function of the repressor that is the product of the lacI gene?

Neelaredoxin is a 15 -kDa protein that is a gene product common in anaerobic prokaryotes. It has superoxide-scavenging activity, and it is constitutively expressed. In addition, its expression is not further induced during its exposure to \(\mathrm{O}_{2}\) or \(\mathrm{H}_{2} \mathrm{O}_{2}\) (Silva, G., et al. \(2001 .\) J. Bacteriol. \(183: 4413-4420\) ). What do the terms constitutively expressed and induced mean in terms of neelaredoxin synthesis?

In this chapter, we focused on the regulation of gene expression in prokaryotes. Along the way, we found many opportunities to consider the methods and reasoning by which much of this information was acquired. From the explanations given in the chapter, what answers would you propose to the following fundamental questions? (a) How do we know that bacteria regulate the expression of certain genes in response to the environment? (b) What evidence established that lactose serves as the inducer of a gene whose product is related to lactose metabolism? (c) What led researchers to conclude that a repressor molecule regulates the lac operon? (d) How do we know that the lac repressor is a protein? (e) How do we know that the trp operon is a repressible con- trol system, in contrast to the lac operon, which is an inducible control system?

Erythritol, a natural sugar abundant in fruits and fermenting foods, is about 65 percent as sweet as table sugar and has about 95 percent fewer calories. It is "tooth friendly" and generally devoid of negative side effects as a human consumable product. Pathogenic Brucella strains that catabolize erythritol contain four closely spaced genes, all involved in erythritol metabolism. One of the four genes \((e r y D)\) encodes a product that represses the expression of the other three genes. Erythritol catabolism is stimulated by erythritol. Present a simple regulatory model to account for the regulation of erythritol catabolism in Brucella. Does this system appear to be under inducible or repressible control?

One of the most prevalent sexually transmitted diseases is caused by the bacterium Chlamydia trachomatis and leads to blindness if left untreated. Upon infection, metabolically inert cells differentiate, through gene expression, to become metabolically active cells that divide by binary fission. It has been proposed that release from the inert state is dependent on heat-shock proteins that both activate the reproductive cycle and facilitate the binding of chlamydiae to host cells. Researchers made the following observations regarding the heat-shock regulatory system in Chlamydia trachomatis: (1) a regulator protein (call it R) binds to a cis-acting DNA element (call it \(\mathrm{D}\) ); (2) \(\mathrm{R}\) and \(\mathrm{D}\) function as a repressor- operator pair; (3) \(\mathrm{R}\) functions as a negative regulator of transcription; (4) \(\mathrm{D}\) is composed of an inverted-repeat sequence; (5) repression by \(R\) is dependent on \(D\) being supercoiled (Wilson \(\&\) Tan, 2002 ). (a) Based on this information, devise a model to explain the heat-dependent regulation of metabolism in Chlamydia trachomatis. (b) Some bacteria, like \(E .\) coli, use a heat-shock sigma factor to regulate heat-shock transcription. Are the above findings in Chlamydia compatible with use of a heat-sensitive sigma factor?

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