Chapter 12: Problem 9
Describe the basic structure of a nucleosome. What is the role of histone H1?
Chapter 12: Problem 9
Describe the basic structure of a nucleosome. What is the role of histone H1?
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Get started for freeSupercoiled DNA is slightly unwound compared to relaxed DNA and this enables it to assume a more compact structure with enhanced physical stability. Describe the enzymes that control the number of supercoils present in the \(E .\) coli chromosome. How much would you have to reduce the linking number to increase the number of supercoils by five?
While much remains to be learned about the role of nucleosomes and chromatin structure and function, recent research indicates that in vivo chemical modification of histones is associated with changes in gene activity. One study determined that acetylation of \(\mathrm{H} 3\) and \(\mathrm{H} 4\) is associated with 21.1 percent and 13.8 percent increases in yeast gene activity, respectively, and that yeast heterochromatin is hypomethylated relative to the genome average (Bernstein et al, 2000 ). Speculate on the significance of these findings in terms of nucleosome-DNA interactions and gene activity.
In instances in the eukaryotic genome, DNA sequences represent evolutionary vestiges of duplicated copies of genes. What are such regions called and what are their characteristics?
A number of recent studies have determined that disease pathogenesis, whether it be related to viruses, cancer, aging, or a host of other causes, is often associated with specific changes in DNA methylation. If such patterns are to be considered as biomarkers for disease diagnosis what requisite criteria would you consider essential to their use?
Mammals contain a diploid genome consisting of at least \(10^{9}\) bp. If this amount of DNA is present as chromatin fibers, where each group of 200 bp of DNA is combined with 9 histones into a nucleosome and each group of 6 nucleosomes is combined into a solenoid, achieving a final packing ratio of \(50,\) determine (a) the total number of nucleosomes in all fibers, (b) the total number of histone molecules combined with DNA in the diploid genome, and (c) the combined length of all fibers.
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