Chapter 12: Problem 4
Describe the structure of giant polytene chromosomes and how they arise.
Chapter 12: Problem 4
Describe the structure of giant polytene chromosomes and how they arise.
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Get started for freeWhat genetic process is occurring in a puff of a polytene chromosome? How do we know this experimentally?
Review the Chapter Concepts list on \(\mathrm{p} .322 .\) These all relate to how DNA is organized in viral, prokaryote, and eukaryote chromosomes. Write a short essay that contrasts the major differences between the organization of DNA in viruses and bacteria versus eukaryotes.
Mammals contain a diploid genome consisting of at least \(10^{9}\) bp. If this amount of DNA is present as chromatin fibers, where each group of 200 bp of DNA is combined with 9 histones into a nucleosome and each group of 6 nucleosomes is combined into a solenoid, achieving a final packing ratio of \(50,\) determine (a) the total number of nucleosomes in all fibers, (b) the total number of histone molecules combined with DNA in the diploid genome, and (c) the combined length of all fibers.
Examples of histone modifications are acetylation (by histone acetyltransferase, or HAT), which is often linked to gene activation, and deacetylation (by histone deacetylases, or HDACs), which often leads to gene silencing typical of heterochromatin. Such heterochromatinization is initiated from a nucleation site and spreads bidirectionally until encountering boundaries that delimit the silenced areas. Recall from earlier in the text (see Chapter 4 ) the brief discussion of position effect, where repositioning of the \(w^{+}\) allele in Drosophila by translocation or inversion near heterochromatin produces intermittent \(w^{+}\) activity. In the heterozygous state \(\left(w^{+} / w\right),\) a variegated eye is produced, with white and red patches. How might one explain position-effect variegation in terms of histone acetylation and/or deacetylation?
A number of recent studies have determined that disease pathogenesis, whether it be related to viruses, cancer, aging, or a host of other causes, is often associated with specific changes in DNA methylation. If such patterns are to be considered as biomarkers for disease diagnosis what requisite criteria would you consider essential to their use?
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