Question

You learned in this chapter about the molecular basis of apoptosis in the nematode worm, C. elegans. In humans, the BCL2 gene is a homolog of the worm ced-9 gene. What experiment would convince you that the human BCL2 protein is functional homologous to the worm CED-9 protein?

Short answer

To investigate if the BCL2 protein (from humans) and the CED-9 protein (from C. elegans) are functionally homologous, introduce the human BCL2 gene into C. elegans with the ced-9 gene knocked out. If the introduced BCL2 gene rescues the phenotype, it indicates these proteins are functionally homologous. However, conducting control experiments with a non-functional BCL2 gene can further validate this.

Step-by-step solution

Understand gene homology

A homologous gene implies the genes share a common ancestor. These genes are usually of similar sequence and often have the same or similar function across different species. In this case, it is stated that BCL2 gene in humans is homologous to the ced-9 gene in the worm C. elegans.

Propose an experiment

Propose a proper experimental design to investigate whether BCL2 protein in humans (produced by the BCL2 gene) has the same function as the CED-9 protein in the worm C. elegans (produced by the ced-9 gene). The experiment could be to introduce the human BCL2 gene into a C. elegans worm with the ced-9 gene knocked out. If the BCL2 gene from the human can rescue the worm's phenotype (i.e., the worms exhibit normal apoptosis), it suggests that the BCL2 protein has the same function as the CED-9 protein.

Consider control experiments

To strengthen the conclusion, consider performing control experiments. For instance, observe the effect of a non-functional (mutant) BCL2 gene introduction into the worm. The phenotype should not be rescued, and this result will clarify that it is indeed the BCL2 gene's functional properties, not just its presence, that rescues the phenotype.

Analyze results

After performing the experiment and control tests, analyze the results. If the human BCL2 gene rescues the phenotype in C. elegans, then the BCL2 protein is likely functionally equivalent to the CED-9 protein in C. elegans. If not, then they likely have different functions, despite their gene homology.

Key concepts

BCL2 gene

The BCL2 gene plays a crucial role in human apoptosis, a programmed cell death process essential for maintaining healthy cell populations. It stands for B-cell lymphoma 2 and it codes for a protein that helps regulate cell death by preventing apoptosis. This can be particularly important in cancer cells, which may have disrupted apoptosis pathways to allow for unchecked growth.
Functions of the BCL2 gene include:

• Regulation of mitochondrial membrane potential
• Prevention of cytochrome c release
• Inhibition of caspase activation, which are the enzymes that carry out apoptosis

Mutations or overexpression of BCL2 can be harmful, as they can lead to cancer by inhibiting the normal apoptotic process. Research into BCL2 and its inhibitors is ongoing in cancer therapies so that apoptosis can be resumed in cancer cells. In terms of evolutionary biology, while the BCL2 gene functions highly in apoptosis regulation, its homologous nature to the CED-9 gene in C. elegans highlights a conserved function across species.

CED-9 protein

The CED-9 protein is an integral part of the apoptotic pathway in C. elegans, a model organism that is frequently used to study genetic and cellular processes due to its simplicity. CED-9 belongs to the Bcl-2 family of proteins, which play similar roles in apoptosis regulation across different organisms.
Key roles of CED-9 protein include:

• Protection of cells from untimely apoptosis
• Maintenance of cell survival by inhibiting apoptotic proteins like EGL-1

Understanding the CED-9 protein's function helps scientists comprehend apoptosis and its evolutionary conservation. The research is pivotal in drawing parallels between human and C. elegans genetics, and it also opens new opportunities for developing therapeutic interventions in diseases where apoptosis is disrupted. CED-9's role is a testament to the power of genetic conservation, showcasing how complex life processes are preserved and utilized across species for fundamental cellular functions.

Gene Homology

Gene homology refers to similarities between genes or proteins due to shared ancestry. It can be observed at various levels, including genetic sequences and functional roles, across different species. In the context of apoptosis, BCL2 in humans and ced-9 in C. elegans serve as classic examples of homologous genes with conserved functions.
Gene homology's significance includes:

• Facilitating understanding of genetic functions across species
• Assisting in evolutionary studies and predictions
• Enabling functional analyses through cross-species experimentation

The discovery of homologous genes like BCL2 and ced-9 helps scientists speculate that a gene's role in one organism could confer similar functionality in another. For instance, an experiment that introduces the BCL2 gene in C. elegans to replace the ced-9 gene can demonstrate gene homology effectively. If the apoptosis process functions similarly, it affirms their evolutionary and functional correspondence. This understanding fosters advancements in biotechnology, medicine, and evolutionary biology by emphasizing the interconnectedness of life on Earth.